Fred's BLAT Query Interface ® © ™
Load your FASTA-format
query
here:
Load your FASTA-format
database
here:
Word Size
6
7
8
9
10
11
12
13
14
15
16
17
18
(Make it bigger for speed, but smaller for sensitivity.)
Step Size
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
(Make it bigger for speed, but smaller for sensitivity. Must be <= Word Size.)
Output Format
blast
tab delimited
Filtering Options for
Tab-Delimited
Output:
Return only matches greater or equal to
total basepairs
contiguous basepairs
% of query matched